分子动力学入门
课上:八个水分子为例的分子动力学。
分子动力学
步骤
建模
在 MS 中建立模型,上传,vaspkit-106。
结构优化
INCAR 为:
详情
[zjb@op geo2]$ cat INCAR
Global Parameters
ISTART = 0 (Read existing wavefunction; if there)
# ISPIN = 2 (Spin polarised DFT)
ICHARG = 2 (Non-self-consistent: GGA/LDA band structures)
LREAL = .FALSE. (Projection operators: automatic)
ENCUT = 400 (Cut-off energy for plane wave basis set, in eV)
PREC = Normal (Precision level)
LWAVE = .FALSE. (Write WAVECAR or not)
LCHARG = .FALSE. (Write CHGCAR or not)
NPAR = 4 (Max is no. nodes; don't set for hybrids)
ALGO = Fast
Electronic Relaxation
ISMEAR = 0 (Gaussian smearing; metals:1)
SIGMA = 0.05 (Smearing value in eV; metals:0.2)
EDIFF = 1E-04 (SCF energy convergence; in eV)
Ionic Relaxation
NSW = 100 (Max electronic SCF steps)
IBRION = 2 (Algorithm: 0-MD; 1-Quasi-New; 2-CG)
POTIM = 0.3
#ISIF = 2 (Stress/relaxation: 2-Ions, 3-Shape/Ions/V, 4-Shape/Ions)
EDIFFG = -1E-02 (Ionic convergence; eV/AA)
# ISM = 2 (Symmetry: 0=none; 2=GGA; 3=hybrids)
大约 1 分钟